Team:UGent Belgium/Poster

Who are we and why are we here?
WATER. The basis for all life on earth and certainly the most important thing for humans next to oxygen and love. Yet, it is becoming increasingly scarce even in regions with a temperate climate like Ghent. Every day more and more people experience the effects of climate change, with droughts being the most common one. Water travels around the globe in many forms from water in rivers, lakes and oceans to the smallest ice crystals in the clouds.

Vsycle aims to provide solutions to a large number of problems involving water scarcity by controlling local weather patterns with the help of synthetic biology and a nature-inspired design. At the university of Ghent, a team of bio-engineers and industrial bioscience engineers came together to do what engineers do best: solve problems. Since Ghent is a hub for biotechnology and engineers like solving problems, we were able to propose a strategy to produce a non-toxic and biodegradable cloud seeding agent.
The problem
Climate change, aging infrastructure and poor leadership have made water scarcity the problem it is today. Although many people are working on solutions to provide water where the need is the greatest, the largest readily usable source of fresh water are clouds. One technique to use this vast resource is cloud seeding.

Cloud seeding is a procedure that can induce rain and increase the amount of rainfall. The main disadvantage of the current cloud seeding methods is that the cloud seeding agent that is used, silver iodide (AgI), is toxic to living organisms. Therefore, large-scale cloud seeding operations are harmful to the environment. Cloud seeding can be a solution for problems climate change might bring upon us, but will not be the solution to solve climate change itself. Nevertheless, a non-toxic alternative will allow using cloud seeding on a larger scale and in more applications, both in cities and rural areas.
The Vsycle solution
Team Vsycle wants to provide a solution for these problems: a biological, bio-degradable and non-toxic ice nucleus is designed with the use of synthetic biology. More specifically, E. coli cells expressing a special protein, called ice nucleation protein (INP), on their membrane. For this, the ice nucleation protein from Pseudomonas syringae is used. This protein helps the bacteria to facilitate the formation of ice crystals by attracting water molecules in positions similar to the positioning of water molecules in an ice crystal. Therefore, these cells are perfect as ice nuclei to use in cloud seeding.

Visual representation of the helix structure of INP and how water molecules are entrapped in the helix loops. Hydrophilic functional groups are represented by blue dots, hydrophobic functional groups by red dots and water molecules by orange dots. The resulting distances between the entrapped water molecules are similar to those in an ice lattice (figure on the right); Adapted from (Garnham et al., 2011; Davies et al., 2002)
Engineering
Although cloud seeding can be done using pure INPs, a bacterial ghost is constructed, which will be more efficient in freezing supercooled water. On top of that is the downstream processing of the pure protein more complex in comparison to that of the bacterial ghost. A bacterial ghost consists of an E. coli that expresses INPs on its outer membrane, which the INPs perforate at a certain point. This causes all the cell organelles and cytoplasm to be expelled from the bacteria which results in an empty cell envelope. The gene responsible for this phenomenon is the lysis E gene. The protein E expressed by this gene makes tunnels in the membrane of the bacteria causing it to expel its cytoplasmatic contents and kill the bacteria in the process. This also creates a unique opportunity because the bacterial ghost construct will no longer be considered to be GMO.

To achieve this, a plasmid is designed that contains both InaZ (INP gene) and protein E gene on the same backbone. This plasmid is constructed using multiple techniques like PCR, CPEC and BioBricking. The plasmid is then used to transform E. coli cells. After transformation the bacteria are grown through fermentation. The INP gene has a constitutive promotor which means that the INP expression starts immediately, without the need of an inducer. The protein E gene is preceded by an inducible promotor. Cell lysis is induced when the stationary phase of growth starts. This is determined using optical density (OD) coupled with cell dry weight (CDW) or colony-forming unit (CFU).

After fermentation, the batch of cells must undergo further downstream processing. First of all, the biomass of the medium is separated by means of Tangential Flow Filtration (TFF) (Langemann et al., 2010) or centrifugation (Amara, Salem-Bekhit, & Alanazi, 2013); (Rabea et al., 2018). In order to guarantee that the product does not contain GMO’s, all remaining viable cells and DNA have to be destroyed which can be done by using β-propiolactone (Amara et al., 2013). Subsequently, the biomass is separated from other cell material and chemicals by applying diafiltration. Finally, the cells are washed several times with sterile water. The bacterial ghost construct will then be lyophilized to be compatible with pneumatic flares as further discussed in the part about dispersion.

To test whether or not our E-lysis was efficient, the CFU of the samples taken before and after the fermentation are determined. The efficiency will be highest when all bacteria are lysate, this will result in very few or no CFUs after lysis.

The efficiency of the ice nucleation activity of the bacterial ghost construct can be tested by performing a droplet freezing essay. In this assay the bacterial ghosts are added to a number of water droplets. By repeating the test with a series of temperatures and looking at which temperature most droplets freeze, the freezing temperature of the droplets with ice nuclei can be determined.

Dispersion
How can a cloud seeding agent actually be dispersed? For this, the German company Cloud Seeding Technologies, who are developing pneumatic flares, was contacted. These flares are electronically ignited. A pre-prepared powder is ejected by a gas and its chemical composition does not change because no burning of the active compound takes place. This is a big advantage because the most common used flares produce heat. This heat would decompose the biological compound which would be undesirable.



To bring these flares at the right height, drones or airplanes are suggested. Drones are preferable over airplanes because they are not only more ecological, but also cheaper and safer. In general, it would be possible to use drones specifically developed for cloud seeding as long as there is permission to fly above a certain height from the local institution that controls the airspace.

To anticipate on legislation issues regarding GMO’s, we constructed bacterial ghosts which not considered GMO's. This will definitely help for the legislation around the dispersion as well as the further economic development of the product. Most important is that the cloud seeding agent is accessible for everyone.

TARU – MK1, a pneumatic flare. Source: Cloud Seeding Technologies

Applications
If a non-toxic alternative were discovered, cloud seeding could be used by farmers to prevent heavy hail and rain storms form destroying their crops. Governments and private entities could work together to protect buildings, cars and machinery form the same risks and avoid billions of euros of damage combined.

Next to hail suppression, cloud seeding can be used to enhance or reduce rain. This could be useful when farmers need some rain in a dry season or when infrastructure has to be protected from superfluous rainfall. Even water scarcity in general could be reduced.

On top of that, fog and low clouds can be dispersed in an environmentally friendly way. This is extremely useful at airports where improved visibility is vital on foggy days. Especially in places like the UK and Belgium, which have a high incidence of fog.

Last, but most definitely not least, the amount of natural snowfall can be increased to supplement and sustain fresh water reserves or create the ideal conditions for winter sports.

The most important advantage a non-toxic cloud seeding agent would have, is the scale and variety of problems it could solve.
Human practices
Experts and farmers were consulted regarding their opinion and concerns. The goal was to get an overview about how much farmers are affected with problems due to drought, floods, etc. and what kind of regulations the users would have to follow for the optimal use of the new way of cloud seeding. Based on the results of the surveys, a business plan was written for the project, where standards and values for the project and the use of cloud seeding as a technique are proposed.

A lot of time and energy has been put into both outreach and science communication. Not only with the help of social media and the press, but also by sending out brochures and giving presentations, to reach as many people as possible to tell them about Vsycle. To reach the younger generation, a game was developed in which they can learn about the project in a more interactive way and a school lesson was prepared with an additional animation video. Together with the other Belgium team Bubbly, a series consisting of six YouTube videos about Biopython was made. This was also part of science communication.