Team:Waterloo/Collaborations

We collaborated with two teams this year, Tuebingen and OhioState. We helped each other with protein design, molecular dynamics, and mathematical modeling. We also presented our project at national conferences, namely Calgary’s JulyGEM and cGEM, and even ran our own iGEM social in the summer!
TEAMS

Tuebingen iGEM

We collaborated with Tuebingen iGEM on the protein design and molecular dynamics aspects of our projects. Despite very different project motivations, we and Tuebingen both used rational protein design as a tool to improve the metal affinity of metal-binding proteins. We held several video calls over the term to discuss our work and help troubleshoot each others’ molecular dynamics software issues.

We specifically shared advice for using GROMACS (an MD software tool) with quantum mechanical and classical mechanical models and for developing an iterative protein design workflow. Their best advice to us: “repeat until completely bored”.

Zoom call screenshot with Tuebingen
Zoom call screenshot with Tuebingen

OhioState iGEM

We collaborated with OhioState iGEM on the modelling aspects of their project. OhioState studied strategies for microbial biocontainment, and we helped develop strategies for engineering design, for modelling their proposed systems, and for retrieving relevant parameters from literature.

Zoom call screenshot with OhioState
Zoom call screenshot with OhioState
SUMMER MIXER

In July, we hosted a Canadian-wide virtual social hour to encourage communication between all members of the teams, meet new people, and build our local synthetic biology community. Over 20 students from six canadian igem teams chatted with three different people about their interests, their iGEM project for this year, and their favourite quarantine activities.

The goal of this event was primarily to promote community interaction across the country in a less formal setting given the transition to online conferences and meetings.

Zoom call screenshot with Lethbridge
Zoom call screenshot with Lethbridge
CONFERENCES

JulyGEM

At the University of Calgary’s second annual JulyGEM event, we gave our first project pitch of the season and received feedback from judges early enough to implement for the iGEM Giant Jamboree. We also competed in fun games with teams made up of iGEM students across the world!

Team members also volunteered on the logistics team planning the conference working on fundraising material and event scheduling.

Zoom call screenshot with JulyGEM team
Zoom call screenshot with JulyGEM team

cGEM

In October, we participated in cGEM, a virtual conference showcasing the synthetic biology projects of Canadian iGEM teams. Due to the COVID-19 pandemic resulting in funding uncertainties and various restrictions, the conference was introduced to support Canadian iGEM teams. The conference consisted of a competition where we received valuable feedback on our project design and progress, opportunities to connect with other Canadian teams, and workshops and panels hosted by experts in the field. Waterloo iGEM won a gold medal standing at cGEM!

Instagram story of our cGEM presentation
Instagram story of our cGEM presentation