Difference between revisions of "Team:ZJU-China/Safety"

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<style>
 
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+
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+
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+
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    #top {display:none;}
+
    #firstHeading,
      
+
    #home_logo,
    #bodyContent a[href ^="https://"], .link-https { padding-right:0px;}
+
     #sideMenu {
 +
        display: none;
 +
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     #bodyContent p{font-size:large;}
+
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+
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+
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 +
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 +
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 +
 
 +
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 +
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 +
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 +
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 +
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 +
 
 +
    #top {
 +
        display: none;
 +
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 +
 
 +
    #bodyContent a[href ^="https://"],
 +
    .link-https {
 +
        padding-right: 0px;
 +
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 +
 
 +
     #bodyContent p {
 +
        font-size: large;
 +
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 +
 
 +
     #bodyContent h1,
 +
    h2,
 +
    h3,
 +
    h4,
 +
    h5,
 +
    h6 {
 +
        font-family: 'Nunito', sans-serif;
 +
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 +
 
 +
     #bodyContent ul {
 +
        margin: 0 0 0 0;
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 +
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</style>
 
</style>
  
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+
 
  
 
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+
 
 
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+
 
   
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+
 
 
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     <script type="text/javascript" src="https://2020.igem.org/wiki/index.php?title=Template:ZJU-China/JS/barjs/main&action=raw&ctype=text/javascript"></script>
 
     <script type="text/javascript" src="https://2020.igem.org/wiki/index.php?title=Template:ZJU-China/JS/barjs/main&action=raw&ctype=text/javascript"></script>
  
   
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+
 
  
  
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     <script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
 
     <script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
 
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<style>
+
    <style>
p{
+
        p {
    font_size:40px;
+
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}
+
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+
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+
  
  
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<body style="background-image: url('https://static.igem.org/mediawiki/2020/9/9e/T--ZJU-China--wiki_back2.png');">
 
<body style="background-image: url('https://static.igem.org/mediawiki/2020/9/9e/T--ZJU-China--wiki_back2.png');">
  
<!-- Pre Loader Area start -->
+
    <!-- Pre Loader Area start -->
<div id="preloader">
+
    <div id="preloader">
    <div class="loader"></div>
+
        <div class="loader"></div>
</div>
+
    </div>
<!-- Pre Loader Area End -->
+
    <!-- Pre Loader Area End -->
  
<div class="navigation">
+
    <div class="navigation">
+
    <ul> 
+
        <li> 
+
            <a href="#Cloning" style="background-color: #f6b37f;" class="nav-active rounded"><span>Overview</span></a> 
+
        </li> 
+
        <li> 
+
            <a href="#about"  style="background-color: #7ecef4;" class="rounded"><span>Laboratory Safety</span></a> 
+
        </li> 
+
        <li> 
+
            <a href="#services" style="background-color: #f19ec2;" class="rounded"><span>Insurance of Biosafety</span></a>   
+
        </li> 
+
        <li> 
+
            <a href="#showcase" style="background-color:#eb6877;"class="rounded"><span>Bioethics</span></a>   
+
        </li>
+
        <li> 
+
            <a href="#respon" style="background-color:#d197f7;"class="rounded"><span>Always be Responsible</span></a>   
+
        </li>
+
        <li> 
+
            <a href="#our-team" style="background-color: #cce198" class="rounded"><span>Reference</span></a>   
+
        </li> 
+
     
+
       
+
    </ul> 
+
</div>  
+
  
<section class="menu-section-area" >
+
         <ul>
 
+
             <li>
    <!-- Navigation -->
+
                 <a href="#Cloning" style="background-color: #f6b37f;" class="nav-active rounded"><span>Overview</span></a>
    <nav class="navbar navbar-expand-lg fixed-top d-none d-sm-none d-md-block d-lg-block d-xl-block" id="mainNav" style="background-image: url('https://static.igem.org/mediawiki/2020/b/b9/T--ZJU-China--wiki_navback2.png');" >
+
         <div class="container">
+
             <a class="navbar-brand" href="index.html" style="left:-10%;margin:-20px"><img src="https://static.igem.org/mediawiki/2020/7/7f/T--ZJU-China--temt.png" class="img-fluid" width="150px" ></a>
+
           
+
            <div class="collapse navbar-collapse" id="navbarResponsive" >
+
                 <ul class="navbar-nav text-capitalize ml-auto">
+
                    <li class="nav-item dropdown-box" style="background-color:pink;;opacity: 0.9;">
+
                        <a class="nav-link js-scroll-trigger" href="index.html">Home</a>
+
                     
+
                    </li>
+
                    <li class="nav-item dropdown-box" style="background-color: coral;;opacity: 0.9;">
+
                        <a class="nav-link" href="#">Team</a>
+
                        <ul class="dropdown-list" >
+
                            <li><a href="team.html">Team Members</a></li>
+
                            <li><a href="domain.html">Attributions</a></li>
+
                           
+
                         
+
                        </ul>
+
                    </li>
+
                    <li class="nav-item dropdown-box" style="background-color:cornflowerblue;;opacity: 0.9;">
+
                        <a class="nav-link" href="#">Project</a>
+
                        <ul class="dropdown-list">
+
                            <li><a href="domain.html">Description</a></li>
+
                            <li><a href="background.html">Background</a></li>
+
                            <li><a href="domain.html">Design</a></li>
+
                            <li><a href="experiment.html">Experiment</a></li>
+
                            <li><a href="hosting.html">Result</a></li>
+
                            <li><a href="hosting.html">Demonstrate</a></li>
+
                        </ul>
+
                    </li>
+
                    <li class="nav-item dropdown-box" style="background-color:dodgerblue;opacity: 0.9;">
+
                        <a class="nav-link" href="#">Modeling</a>
+
                        <ul class="dropdown-list">
+
                            <li><a href="services.html">Overview</a></li>
+
                            <li><a href="services-classic.html">xxx Model</a></li>
+
                           
+
                        </ul>
+
                    </li>
+
                    <li class="nav-item dropdown-box" style="background-color:darkslateblue;opacity: 0.9;">
+
                        <a class="nav-link" href="#">Parts</a>
+
                        <ul class="dropdown-list">
+
                            <li><a href="about.html">Measurement</a></li>
+
                            <li><a href="pricing-table.html">Improvement</a></li>
+
                            <li><a href="login.html">New Parts</a></li>
+
                           
+
                        </ul>
+
                    </li>
+
                    <li class="nav-item dropdown-box" style="background-color:indianred;opacity: 0.9;">
+
                        <a class="nav-link" href="#">Human</a>
+
                        <ul class="dropdown-list">
+
                            <li><a href="safety.html">Safety</a></li>
+
                            <li><a href="blog-classic.html">Human Practice</a></li>
+
                           
+
                        </ul>
+
                    </li>
+
                    <li class="nav-item dropdown-box" style="background-color:orchid;opacity: 0.9;">
+
                        <a class="nav-link" href="#">Application</a>
+
                        <ul class="dropdown-list">
+
                            <li><a href="blog-grid.html">Hardware</a></li>
+
                            <li><a href="blog-classic.html">Software</a></li>
+
                           
+
                        </ul>
+
                    </li>
+
                 
+
                </ul>
+
            </div>
+
        </div>
+
    </nav>
+
    <!-- Navigation -->
+
 
+
    <!-- Mobile Menu Start -->
+
    <nav class="mobile_menu hidden d-none">
+
        <a href="index.html"><img class="mobile-logo" src="https://static.igem.org/mediawiki/2020/7/7f/T--ZJU-China--temt.png" alt="Logo"></a>
+
        <ul class="nav navbar-nav navbar-right menu">
+
            <li class="dropdown active">
+
                <a>Home</a>
+
             
+
 
             </li>
 
             </li>
             <li class="dropdown">
+
             <li>
                 <a>Team</a>
+
                 <a href="#about" style="background-color: #7ecef4;" class="rounded"><span>Laboratory Safety</span></a>
                <ul class="sub_menu">
+
                    <li><a href="team.html">Team Members</a></li>
+
                    <li><a href="domain.html">Attributions</a></li>
+
                </ul>
+
 
             </li>
 
             </li>
             <li class="dropdown">
+
             <li>
                 <a>Project</a>
+
                 <a href="#services" style="background-color: #f19ec2;" class="rounded"><span>Insurance of Biosafety</span></a>
                <ul class="sub_menu">
+
                    <li><a href="domain.html">Description</a></li>
+
                    <li><a href="background.html">Background</a></li>
+
                    <li><a href="domain.html">Design</a></li>
+
                    <li><a href="domain.html">Experiment</a></li>
+
                    <li><a href="domain.html">Result</a></li>
+
                    <li><a href="domain.html">Demonstrate</a></li>
+
                </ul>
+
 
             </li>
 
             </li>
             <li class="dropdown">
+
             <li>
                 <a>Modeling</a>
+
                 <a href="#showcase" style="background-color:#eb6877;" class="rounded"><span>Bioethics</span></a>
                <ul class="sub_menu">
+
                    <li><a href="domain.html">Overview</a></li>
+
                    <li><a href="domain.html">xxx Model</a></li>
+
                </ul>
+
 
             </li>
 
             </li>
             <li class="dropdown">
+
             <li>
                 <a>Parts</a>
+
                 <a href="#respon" style="background-color:#d197f7;" class="rounded"><span>Always be Responsible</span></a>
                <ul class="sub_menu">
+
                    <li><a href="domain.html">Measurement</a></li>
+
                    <li><a href="domain.html">Improvement</a></li>
+
                    <li><a href="domain.html">New Parts</a></li>
+
                </ul>
+
 
             </li>
 
             </li>
             <li class="dropdown">
+
             <li>
                 <a>Human</a>
+
                 <a href="#our-team" style="background-color: #cce198" class="rounded"><span>Reference</span></a>
                <ul class="sub_menu">
+
                    <li><a href="safety.html">Safety</a></li>
+
                    <li><a href="blog-classic.html">Human Practice</a></li>
+
                </ul>
+
 
             </li>
 
             </li>
            <li class="dropdown">
+
 
                <a>Application</a>
+
 
                <ul class="sub_menu">
+
                    <li><a href="blog-grid.html">Hardware</a></li>
+
                    <li><a href="blog-classic.html">Software</a></li>
+
                </ul>
+
            </li>
+
           
+
 
         </ul>
 
         </ul>
     </nav>
+
     </div>
    <!-- Mobile Menu End -->
+
</section>
+
<!--Main Menu/ Mobile Menu Section-->
+
  
<div class="pagename">
+
    <section class="menu-section-area">
     <h1>Safety</h1>
+
 
</div>
+
        <!-- Navigation -->
 +
        <nav class="navbar navbar-expand-lg fixed-top d-none d-sm-none d-md-block d-lg-block d-xl-block" id="mainNav"
 +
            style="background-image: url('https://static.igem.org/mediawiki/2020/b/b9/T--ZJU-China--wiki_navback2.png');">
 +
            <div class="container">
 +
                <a class="navbar-brand" href="index.html" style="left:-10%;margin:-20px"><img src="https://static.igem.org/mediawiki/2020/7/7f/T--ZJU-China--temt.png" class="img-fluid" width="150px"></a>
 +
 
 +
                <div class="collapse navbar-collapse" id="navbarResponsive">
 +
                    <ul class="navbar-nav text-capitalize ml-auto">
 +
                        <li class="nav-item dropdown-box" style="background-color:pink;;opacity: 0.9;">
 +
                            <a class="nav-link js-scroll-trigger" href="index.html">Home</a>
 +
 
 +
                        </li>
 +
                        <li class="nav-item dropdown-box" style="background-color: coral;;opacity: 0.9;">
 +
                            <a class="nav-link" href="#">Team</a>
 +
                            <ul class="dropdown-list">
 +
                                <li><a href="team.html">Team Members</a></li>
 +
                                <li><a href="domain.html">Attributions</a></li>
 +
 
 +
 
 +
                            </ul>
 +
                        </li>
 +
                        <li class="nav-item dropdown-box" style="background-color:cornflowerblue;;opacity: 0.9;">
 +
                            <a class="nav-link" href="#">Project</a>
 +
                            <ul class="dropdown-list">
 +
                                <li><a href="domain.html">Description</a></li>
 +
                                <li><a href="background.html">Background</a></li>
 +
                                <li><a href="domain.html">Design</a></li>
 +
                                <li><a href="experiment.html">Experiment</a></li>
 +
                                <li><a href="hosting.html">Result</a></li>
 +
                                <li><a href="hosting.html">Demonstrate</a></li>
 +
                            </ul>
 +
                        </li>
 +
                        <li class="nav-item dropdown-box" style="background-color:dodgerblue;opacity: 0.9;">
 +
                            <a class="nav-link" href="#">Modeling</a>
 +
                            <ul class="dropdown-list">
 +
                                <li><a href="services.html">Overview</a></li>
 +
                                <li><a href="services-classic.html">xxx Model</a></li>
 +
 
 +
                            </ul>
 +
                        </li>
 +
                        <li class="nav-item dropdown-box" style="background-color:darkslateblue;opacity: 0.9;">
 +
                            <a class="nav-link" href="#">Parts</a>
 +
                            <ul class="dropdown-list">
 +
                                <li><a href="about.html">Measurement</a></li>
 +
                                <li><a href="pricing-table.html">Improvement</a></li>
 +
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        <h1>Safety</h1>
 +
    </div>
 +
 
 +
    <div id="scrollable">
  
<div id="scrollable">
 
  
   
 
 
         <div class="pagestyle" style="background-image: url('https://static.igem.org/mediawiki/2020/c/cd/T--ZJU-China--wiki_navback.jpg');top:120px;">
 
         <div class="pagestyle" style="background-image: url('https://static.igem.org/mediawiki/2020/c/cd/T--ZJU-China--wiki_navback.jpg');top:120px;">
<div class="section Cloning" id="Cloning">
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            <div class="section Cloning" id="Cloning">
 
                 <div class="container1">
 
                 <div class="container1">
  
                <h2>Overview</h2>
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                    <h2>Overview</h2>
               
+
 
                <p>
+
                    <p>
                    When we had already chosen to develop a project that aims to diagnose HER2 positive breast cancer, we soon realized that Mag-HER2-someMagHER2some is designed for patients in urgent conditions, and we should take strict safety measures to ensure our final product is qualified. To aviod provoking tensions between doctor-patient relationships and make MagHER2some as a accountable product to users and the whole society, we considered and evaluated each safety and ethical issue that might happen in real world.
+
                        When we had already chosen to develop a project that aims to diagnose HER2 positive breast cancer, we soon realized that Mag-HER2-someMagHER2some is designed for patients in
                    ZJU-China 2019 was developed a project focus on female physical problems, either. The comprehensive discussion on bioethics and safety that they conducted last ye,,...ar provides useful guidance to us. As they mentioned before, it is of high importance for us to concentrate on self-monitoring and ethical counseling. For this reason, we considered about possible risks respecting laboratory, environment, clinical application, and society.
+
                        urgent conditions, and we should take strict safety measures to ensure our final product is qualified. To aviod provoking tensions between doctor-patient relationships and make
                    Browse following contents of this page for more safety & ethics details. You can also move to Human Practice Page to figure out how we conducted our Human Practices activities with our consideration of safety and ethics.
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                        MagHER2some as a accountable product to users and the whole society, we considered and evaluated each safety and ethical issue that might happen in real world.
                </p>
+
                        ZJU-China 2019 was developed a project focus on female physical problems, either. The comprehensive discussion on bioethics and safety that they conducted last ye,,...ar
                <br>
+
                        provides useful guidance to us. As they mentioned before, it is of high importance for us to concentrate on self-monitoring and ethical counseling. For this reason, we
                <br>
+
                        considered about possible risks respecting laboratory, environment, clinical application, and society.
               
+
                        Browse following contents of this page for more safety & ethics details. You can also move to Human Practice Page to figure out how we conducted our Human Practices activities
 +
                        with our consideration of safety and ethics.
 +
                    </p>
 +
                    <br>
 +
                    <br>
 +
 
 
                 </div>
 
                 </div>
 
             </div>
 
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             <div class="section about" id="about">
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             <div class="section about" id="about">
 
                 <div class="container1">
 
                 <div class="container1">
               
 
                        <h2>Laboratory Safety</h2>
 
                        <p>
 
                            Working with living modified organisms is always risky. All standard precautions must be taken. Before starting to work in the lab, every member of our team was required to attend the laboratory safety lesson and take a biosafety examination. Moreover, we have received extensive guidance and supervision regarding all our activities took place in our laboratory, including study, discussion and equipment usage by our team PI, Prof. Ming Chen and experimental instructor, Associate Prof. Fan Yang to ensure the laboratory safety.
 
                        </p>
 
  
                        <br>
+
                    <h2>Laboratory Safety</h2>
                          
+
                    <p>
 +
                         Working with living modified organisms is always risky. All standard precautions must be taken. Before starting to work in the lab, every member of our team was required to
 +
                        attend the laboratory safety lesson and take a biosafety examination. Moreover, we have received extensive guidance and supervision regarding all our activities took place in
 +
                        our laboratory, including study, discussion and equipment usage by our team PI, Prof. Ming Chen and experimental instructor, Associate Prof. Fan Yang to ensure the laboratory
 +
                        safety.
 +
                    </p>
  
                       
+
                    <br>
                       
+
                    <p>
                        <p>
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                        <b>Wearing safety:</b>Everyone wears protective lab coats, gloves and safety glasses before laboratory activities. Besides, due to the epidemic situation of COVID-19, everyone
                            <b>Wearing safety:</b>Everyone wears protective lab coats, enclosed leather shoes, gloves and safety glasses before laboratory activities.
+
                         must wear a mask as he is in the lab.
                         </p>
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                    </p>
                         <p>
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                    <div class="imgbox">
                            <b>Storage safety:</b>The chemical and biological reagents are stored in the proper place and suitable temperature. Hazardous or corrosive chemicals are stored separately.
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                         <img src="https://static.igem.org/mediawiki/2020/f/f7/T--ZJU-China--Safety_fig1.png" alt="">
                        </p>
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                        <h6>Fig.1 Drawer specially for gloves and masks</h6>
 +
                    </div>
 +
                    <div class="imgbox">
 +
                        <img src="https://static.igem.org/mediawiki/2020/d/db/T--ZJU-China--Safety_fig2.png" alt="">
 +
                        <h6>Fig.2 Door hanging our protective lab coats</h6>
 +
                    </div>
 +
                    <p>
 +
                        <b>Storage safety:</b>The chemical and biological reagents are stored in the proper place and suitable temperature. Hazardous or corrosive chemicals are stored separately.
 +
                    </p>
 +
                    <div class="imgbox">
 +
                        <img src="https://static.igem.org/mediawiki/2020/5/5d/T--ZJU-China--Safety_fig.3-5.png" alt="">
 +
                        <h6>Fig.3-5 Storage for chemical and biological reagents, students should record every time when using chemicals.</h6>
 +
                    </div>
  
                        <p>
+
                    <p><b>Fire and electricity safety:</b> The temperature of the heater should not be set over 50℃ and the there must be at least one student in the lab when the heater is working.
                            <b>Safety Apparatus:</b> Our iGEM lab is equipped with safety apparatus such as fire extinguishers, emergency showers, eyewash stations, and first aid kits in case of dire situations.
+
                         And the power should be turned off before the last one leaves the lab every day.</p>
                         </p>
+
                    <div class="imgbox">
 +
                        <img src="https://static.igem.org/mediawiki/2020/7/70/T--ZJU-China--Safety_fig6.png" alt="">
 +
                        <h6>Fig.6 Power switch and heater</h6>
 +
                    </div>
  
                         <p>
+
 
                            <b>Waste disposal safety: </b>
+
 
                         </p>
+
                    <p>
                          
+
                         <b>Safety Apparatus:</b> Our iGEM lab is equipped with safety apparatus such as fire extinguishers, emergency showers, eyewash stations, and first aid kits in case of dire
           
+
                        situations.
                 </div>  
+
                    </p>
 +
                    <div class="imgbox">
 +
                        <img src="https://static.igem.org/mediawiki/2020/1/1e/T--ZJU-China--Safety_fig7-8.png" alt="">
 +
                        <h6>Fig.7&8 The fire blanket and the fire extinguisher.</h6>
 +
                    </div>
 +
                    <div class="imgbox">
 +
                        <img src="https://static.igem.org/mediawiki/2020/4/4e/T--ZJU-China--Safety_fig9-10.png" alt="">
 +
                        <h6>Fig.9&10 The eyewash equipment and the emergency shower.</h6>
 +
                    </div>
 +
                    <div class="imgbox">
 +
                        <img src="https://static.igem.org/mediawiki/2020/a/ae/T--ZJU-China--Safety_fig11.png" alt="">
 +
                        <h6>Fig.11 The first-aid case.</h6>
 +
                    </div>
 +
                    <p>
 +
                        <b>Waste disposal safety: </b>
 +
                    </p>
 +
                    <div class="imgbox">
 +
                         <img src="https://static.igem.org/mediawiki/2020/2/27/T--ZJU-China--Safety_fig12.png" alt="">
 +
                        <h6>Fig. 12 Flow chart of waste disposal.</h6>
 +
                    </div>
 +
                    <div class="imgbox">
 +
                        <img src="https://static.igem.org/mediawiki/2020/1/1c/T--ZJU-China--Safety_fig13-14.png" alt="">
 +
                        <h6>Fig. 13&14 Garbage classification</h6>
 +
                    </div>
 +
                    <p>
 +
                         <b>New safety measures under the epidemic situation of COVID-19:</b> Due to the epidemic situation of COVID-19, all laboratories of Zhejiang University had strengthened the measures to prevent and control the virus. QR scanning and registration signing every day provided 2 entry records to track the members of ZJU-iGEM. And as we mentioned above, masks must be worn when in the lab.
 +
                    </p>
 +
                    <div class="imgbox">
 +
                        <img src="https://static.igem.org/mediawiki/2020/d/d3/T--ZJU-China--Safety_fig15-17.png" alt="">
 +
                        <h6>Fig. 15-17 QR canning and signing for lab entry record</h6>
 +
                    </div>
 +
 
 +
                 </div>
 
             </div>
 
             </div>
             <div class="section services" id="services">
+
             <div class="section services" id="services">
 
                 <div class="container1">
 
                 <div class="container1">
 
                     <h2>Insurance of Biosafety</h2>
 
                     <h2>Insurance of Biosafety</h2>
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                     <br>
 
                     <br>
 
                     <p>
 
                     <p>
                         As iGEM committee emphasized, we have paid great attention to the possible risks of MagHER2some during our entire process of iGEM. And we have complied with relevant regulations and completed the filling of safety forms and animal use form carfully a month earlier.
+
                         As iGEM committee emphasized, we have paid great attention to the possible risks of MagHER2some during our entire process of iGEM. And we have complied with relevant
 +
                        regulations and completed the filling of safety forms and animal use form carfully a month earlier.
 
                     </p>
 
                     </p>
                 
+
 
 
                     <p>
 
                     <p>
 
                         In this page, the main safety issues of our project design are discussed below.
 
                         In this page, the main safety issues of our project design are discussed below.
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                     <h3>Cell-free system</h3>
 
                     <h3>Cell-free system</h3>
 
                     <p>
 
                     <p>
                         The production and release of genetically modified organisms (GMOs) are controversial topics within present scientific community<a href="#our-team"><sup>[1]</sup></a>, thus we also considered about the possibility risks may cause by two chassis organisms <i>>Magnetospirillum gryphiswaldense</i> and <i>SHuffle<sup>®</sup> E.coli</i> and other organisms used in MagHER2some. In accordance with iGEM’s safety rules and standards, we do not plan to release any GMOs actively in any cases to strictly aviod possible ecological disorders happening.  
+
                         The production and release of genetically modified organisms (GMOs) are controversial topics within present scientific community<a href="#our-team"><sup>[1]</sup></a>, thus we
                         Moreover, in accordance with iGEM’s safety rules and standards, our final product is based on native magnetosome and created a cell-free system instead of live bacteria. This design not only meets “no-release” principle perfectly, but also minimizes possible cytotoxicity and immunotoxicity caused by bacteria when our novel MRI contrast agent is injected into our users.
+
                        also considered about the possibility risks may cause by two chassis organisms <i>>Magnetospirillum gryphiswaldense</i> and <i>SHuffle<sup>®</sup> E.coli</i> and other
                         What needs to be added here is the biotools we implemented on MagHER2some are all protein and without any nucleic acid, which means MagHER2some is totally nonhazardous and unable to express any gene in all circumstances, especially when it is released into environment by accdient or injected into patients' circulatory system.
+
                        organisms used in MagHER2some. In accordance with iGEM’s safety rules and standards, we do not plan to release any GMOs actively in any cases to strictly aviod possible
 +
                        ecological disorders happening.
 +
                         Moreover, in accordance with iGEM’s safety rules and standards, our final product is based on native magnetosome and created a cell-free system instead of live bacteria. This
 +
                        design not only meets “no-release” principle perfectly, but also minimizes possible cytotoxicity and immunotoxicity caused by bacteria when our novel MRI contrast agent is
 +
                        injected into our users.
 +
                         What needs to be added here is the biotools we implemented on MagHER2some are all protein and without any nucleic acid, which means MagHER2some is totally nonhazardous and
 +
                        unable to express any gene in all circumstances, especially when it is released into environment by accdient or injected into patients' circulatory system.
 
                     </p>
 
                     </p>
 
                     <br>
 
                     <br>
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                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
                         The main reason why we chose magnetosome as the most basic BioBricks is that it have been proven to be highly biocompatible<a href="#our-team"><sup>[2]</sup></a>. It has been reported that chemical toxicity of magnetosome from iron ions is negligible negligible<a href="our-team"><sup>[3][4]</sup></a> due to the insolubility of Fe3O4. Therefore, the primary safety issues of magnetosome may be relevant to (a) their nanoscale size, which leads to embolism, blockage, and deposition in the body and (b) impurities, particularly proteins, nucleic acids, and polysaccharides associated with magnetosome extracted from bacterial cells, resulting in immunotoxicity.
+
                         The main reason why we chose magnetosome as the most basic BioBricks is that it have been proven to be highly biocompatible<a href="#our-team"><sup>[2]</sup></a>. It has been
 +
                        reported that chemical toxicity of magnetosome from iron ions is negligible negligible<a href="our-team"><sup>[3][4]</sup></a> due to the insolubility of Fe3O4. Therefore, the
 +
                        primary safety issues of magnetosome may be relevant to (a) their nanoscale size, which leads to embolism, blockage, and deposition in the body and (b) impurities, particularly
 +
                        proteins, nucleic acids, and polysaccharides associated with magnetosome extracted from bacterial cells, resulting in immunotoxicity.
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
                         As we had a further understanding of those studies related to the biocompatibility of magnetosome, we found out that existing studies have shown the body tissue distribution and host tissue elimination following administration of magnetosome into the vascular system <a href="#our-team"><sup>[5]</sup></a> and in vitro cytotoxicity for mouse fibroblasts<a href="#our-team"><sup>[6]</sup></a>.  
+
                         As we had a further understanding of those studies related to the biocompatibility of magnetosome, we found out that existing studies have shown the body tissue distribution
 +
                        and host tissue elimination following administration of magnetosome into the vascular system <a href="#our-team"><sup>[5]</sup></a> and in vitro cytotoxicity for mouse
 +
                        fibroblasts<a href="#our-team"><sup>[6]</sup></a>.
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
                         It has been observed that magnetosome displayed targeted distribution in Sprague DawleySD rat liver except other organs, suggesting that magnetosome may avoid incurring organ congestion or infarction in vivo rely on the lower likelihood of congregation than other nanoparticles.  
+
                         It has been observed that magnetosome displayed targeted distribution in Sprague DawleySD rat liver except other organs, suggesting that magnetosome may avoid incurring organ
 +
                        congestion or infarction in vivo rely on the lower likelihood of congregation than other nanoparticles.
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
                         Purified and sterilized magnetosomes were found to be nontoxic to mouse fibroblasts in vitro. Moreover, another research shows that the injection of 1 mg magnetosome did not increase body temperature of rabbits during the pyrogen test, which showed antigens or pyrogens free with magnetosome administration <a href="#our-team"><sup>[7]</sup></a>.
+
                         Purified and sterilized magnetosomes were found to be nontoxic to mouse fibroblasts in vitro. Moreover, another research shows that the injection of 1 mg magnetosome did not
 +
                        increase body temperature of rabbits during the pyrogen test, which showed antigens or pyrogens free with magnetosome administration <a href="#our-team"><sup>[7]</sup></a>.
 
                     </p>
 
                     </p>
  
 
                     <br>
 
                     <br>
                   
+
 
                   
+
 
 
                     <p>
 
                     <p>
 
                         <b>B. ZZ domain</b>
 
                         <b>B. ZZ domain</b>
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
                    ZZ domain is a homologous immunoglobulin (Ig)-binding domain which belongs to <i>Staphy- lococcus aureus</i> protein A (SpA). According to our biological engineering, we created a recombinant protein mamC-ZZ which is able to bind to the fragment crystallizable (Fc) region of single chain antibody fragment (scFv) tightly. ZZ domain is a reactive antibody-binding BioBricks, and SpA which ZZ domain belongs to is widely used in clinical application<a href="#our-team"><sup>[8][9]</sup></a>, refers to a conclusion that ZZ domain is safe enough to be used as a BioBricks.
+
                        ZZ domain is a homologous immunoglobulin (Ig)-binding domain which belongs to <i>Staphy- lococcus aureus</i> protein A (SpA). According to our biological engineering, we
 +
                        created a recombinant protein mamC-ZZ which is able to bind to the fragment crystallizable (Fc) region of single chain antibody fragment (scFv) tightly. ZZ domain is a reactive
 +
                        antibody-binding BioBricks, and SpA which ZZ domain belongs to is widely used in clinical application<a href="#our-team"><sup>[8][9]</sup></a>, refers to a conclusion that ZZ
 +
                        domain is safe enough to be used as a BioBricks.
 
                     <p></p>
 
                     <p></p>
 
                     <br>
 
                     <br>
Line 343: Line 456:
 
                         <b>C. single chain antibody fragment (scFv)</b>
 
                         <b>C. single chain antibody fragment (scFv)</b>
 
                     </p>
 
                     </p>
                   
+
 
 
                     <p>
 
                     <p>
                         Single chain antibody fragment (scFv) is the most significant important part of our biological engineering design that determines diagnostic efficiency and imaging results of Mag-HER2-someMagHER2some. Accordingly, we chose a certain kind of scFv called modified from a widely use breast cancer medicine Trastuzumab, which has the ability to that binds with high affinity to the extracellular domain of HER2 in a high affinity way. Trastuzumab is a relatively safe and usually well-tolerated drug<a href="#our-team"><sup>[10]</sup></a>. As a monoclonaln antibody, trastuzumab is not modulate by the classic routes of drug elimination<a href="#our-team"><sup>[11]</sup></a>. Its clearance does not appear to occur by excretion and liver metabolism as in conventional drugs, but rather by an analogue mechanism relating to the homeostatic regulation of endogenous immunoglobulin G<a href="#our-team"><sup>[12]</sup></a>. Thus, problems such as drug-drug interactions and interference with unwanted targets (frequently one of the main causes of drugs’ ‘adverse effects’) are unlikely.
+
                         Single chain antibody fragment (scFv) is the most significant important part of our biological engineering design that determines diagnostic efficiency and imaging results of
                       
+
                        Mag-HER2-someMagHER2some. Accordingly, we chose a certain kind of scFv called modified from a widely use breast cancer medicine Trastuzumab, which has the ability to that binds
 +
                        with high affinity to the extracellular domain of HER2 in a high affinity way. Trastuzumab is a relatively safe and usually well-tolerated drug<a
 +
                            href="#our-team"><sup>[10]</sup></a>. As a monoclonaln antibody, trastuzumab is not modulate by the classic routes of drug elimination<a
 +
                            href="#our-team"><sup>[11]</sup></a>. Its clearance does not appear to occur by excretion and liver metabolism as in conventional drugs, but rather by an analogue mechanism
 +
                        relating to the homeostatic regulation of endogenous immunoglobulin G<a href="#our-team"><sup>[12]</sup></a>. Thus, problems such as drug-drug interactions and interference
 +
                        with unwanted targets (frequently one of the main causes of drugs’ ‘adverse effects’) are unlikely.
 +
 
 
                     </p>
 
                     </p>
 
                     <br>
 
                     <br>
 
                     <p>
 
                     <p>
                         <b>Final Product: reflects biosafety as a whole </b>  
+
                         <b>Final Product: reflects biosafety as a whole </b>
 
                         <br>
 
                         <br>
                         Those studies that mentioned above are all strong evidence which ensure all BioBricks of MagHER2some to be safe enough. However, there is still a long term exploration for us to implement our biological engineering into a reliable final product.  
+
                         Those studies that mentioned above are all strong evidence which ensure all BioBricks of MagHER2some to be safe enough. However, there is still a long term exploration for us
 +
                        to implement our biological engineering into a reliable final product.
 
                     </p>
 
                     </p>
 
                     <br>
 
                     <br>
  
 
                     <p>
 
                     <p>
                         <b>Interacrtion between BioBricks:</b>We carried out a series of protein three-dimensional structure prediction about the result of the interaction between recombinant protein mamC-ZZ and Trastuzumab. No evidence shows that any effective domain has been changed or blocked because of interaction, refered MagHER2some to a therapeutic beneficial product.  
+
                         <b>Interacrtion between BioBricks:</b>We carried out a series of protein three-dimensional structure prediction about the result of the interaction between recombinant protein
 +
                        mamC-ZZ and Trastuzumab. No evidence shows that any effective domain has been changed or blocked because of interaction, refered MagHER2some to a therapeutic beneficial
 +
                        product.
 
                     </p>
 
                     </p>
 
                     <br>
 
                     <br>
Line 363: Line 485:
 
                     <p>
 
                     <p>
 
                         <b>Suitable Nanoscale: </b>
 
                         <b>Suitable Nanoscale: </b>
                         We decided to control the size of MagHER2some into a appopriate range (15~35 nm), which not only prevents that MagHER2some would be removed by reticuloendothelial system, but also ensure that MagHER2some can be excreted into urine and feces <a href="#our-team"><sup>[13][14]</sup></a>.
+
                         We decided to control the size of MagHER2some into a appopriate range (15~35 nm), which not only prevents that MagHER2some would be removed by reticuloendothelial system, but
 +
                        also ensure that MagHER2some can be excreted into urine and feces <a href="#our-team"><sup>[13][14]</sup></a>.
 
                     </p>
 
                     </p>
 
                     <br>
 
                     <br>
Line 371: Line 494:
 
                             Further Clinical Trials:
 
                             Further Clinical Trials:
 
                         </b>
 
                         </b>
                         What needed to be mentioned again is we still need a long term exploration on biosafety. We will conduct further clinical trials of MagHER2some, and launch the corresponding drug instruction.You can see more clinical trials design here at Link.
+
                         What needed to be mentioned again is we still need a long term exploration on biosafety. We will conduct further clinical trials of MagHER2some, and launch the corresponding
                       
+
                        drug instruction.You can see more clinical trials design here at Link.
 +
 
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
Line 382: Line 506:
 
                 </div>
 
                 </div>
 
             </div>
 
             </div>
           
+
 
 
             <div class="section showcase" id="showcase">
 
             <div class="section showcase" id="showcase">
 
                 <div class="container1">
 
                 <div class="container1">
 
                     <h2>Bioethics</h2>
 
                     <h2>Bioethics</h2>
 
                     <p>
 
                     <p>
                         We have controlled possible risks from two perspective: laboratory safety and biological engineering safety. However, there are still many potential ethical risks need to be pre-judged.  
+
                         We have controlled possible risks from two perspective: laboratory safety and biological engineering safety. However, there are still many potential ethical risks need to be
 +
                        pre-judged.
 
                     </p>
 
                     </p>
  
 
                     <p>
 
                     <p>
                         “Discussions of bioethical challenges take place in the media, in the academy, in classrooms, but also in labs, offices, and hospital wards.” Questions in bioethics are not just for us. From another perspective, bioethics can be considered in terms of people, animals (experimental objects) and the environment.
+
                         “Discussions of bioethical challenges take place in the media, in the academy, in classrooms, but also in labs, offices, and hospital wards.” Questions in bioethics are not
 +
                        just for us. From another perspective, bioethics can be considered in terms of people, animals (experimental objects) and the environment.
 
                     </p>
 
                     </p>
  
Line 403: Line 529:
 
                     <br>
 
                     <br>
 
                     <p>
 
                     <p>
                         <b>Experimental Animal Use:</b>  
+
                         <b>Experimental Animal Use:</b>
 
                         As the very beginning step of bioethics consideration, we have carried on the comprehensive discussion about this part through our animal use form. Click here.
 
                         As the very beginning step of bioethics consideration, we have carried on the comprehensive discussion about this part through our animal use form. Click here.
 
                     </p>
 
                     </p>
                   
+
 
 
                     <p>
 
                     <p>
                         Moreover, we have been reminded that some contents of our animal use form still need to be improved, because most of the in vitro experiments on Mag-HER2-someMagHER2some have not yet been obtained at that time. Now, in order to supplement and clarify the contents of animal work, we have redesigned the animal experiments based on the results obtained from in vitro experiments, and focus on more details of animal welfare. Please see the file below for details.
+
                         Moreover, we have been reminded that some contents of our animal use form still need to be improved, because most of the in vitro experiments on Mag-HER2-someMagHER2some have
 +
                        not yet been obtained at that time. Now, in order to supplement and clarify the contents of animal work, we have redesigned the animal experiments based on the results obtained
 +
                        from in vitro experiments, and focus on more details of animal welfare. Please see the file below for details.
 
                     </p>
 
                     </p>
                   
+
 
 
                     <p>
 
                     <p>
                         <b>Commercial Matters:</b> We are devoted to bring MagHER2some into medical market, and hope it that can really benefit to no matter doctors or patients. More commercial risks at here. (商业企划书wiki)
+
                         <b>Commercial Matters:</b> We are devoted to bring MagHER2some into medical market, and hope it that can really benefit to no matter doctors or patients. More commercial risks
 +
                        at here. (商业企划书wiki)
 
                     </p>
 
                     </p>
  
 
                     <p>
 
                     <p>
                         <b>Public Engagement:</b> We believe that a scientific research, our sponsors – taxpayers have the right to know and participate, you can see how the public participated in our projects on Link, and how our projects are responsible for the public, such as protecting the personal portrait right of patients.
+
                         <b>Public Engagement:</b> We believe that a scientific research, our sponsors – taxpayers have the right to know and participate, you can see how the public participated in our
 +
                        projects on Link, and how our projects are responsible for the public, such as protecting the personal portrait right of patients.
 
                     </p>
 
                     </p>
 
                     <br>
 
                     <br>
Line 422: Line 552:
  
 
                     <h3>After iGEM</h3>
 
                     <h3>After iGEM</h3>
                        <br>
+
                    <br>
                        <br>
+
                    <br>
 
                     <p>
 
                     <p>
                         <b>Patent and Intellectual Property Protection:</b>  
+
                         <b>Patent and Intellectual Property Protection:</b>
 
                          We plan to patent Mag-HER2-someMagHER2some after iGEM. Therefore, we have already consulted a law firm for relevant issues.
 
                          We plan to patent Mag-HER2-someMagHER2some after iGEM. Therefore, we have already consulted a law firm for relevant issues.
 
                     </p>
 
                     </p>
Line 431: Line 561:
  
 
                     <p>
 
                     <p>
                         <b>Strictly Supplement:</b>  
+
                         <b>Strictly Supplement:</b>
                        Considering biosecurity, we only provide the final products to certified medical institutions only. In this way, the possibility of human error, which people misuse or abuse our products, is minimized.
+
                        Considering biosecurity, we only provide the final products to certified medical institutions only. In this way, the possibility of human error, which people misuse or abuse
 +
                        our products, is minimized.
 
                     </p>
 
                     </p>
  
Line 438: Line 569:
 
                     <p>
 
                     <p>
 
                         <b>Product Instructions:</b>
 
                         <b>Product Instructions:</b>
                        In terms of a thorough biosafety guarantee, we are going to undertake further clinical trials and upload a informative instructions to illustrate the right execution to every doctor who will use MagHER2some in future. More details of clinical trials at here.
+
                        In terms of a thorough biosafety guarantee, we are going to undertake further clinical trials and upload a informative instructions to illustrate the right execution to every
 +
                        doctor who will use MagHER2some in future. More details of clinical trials at here.
 
                     </p>
 
                     </p>
  
  
  
                 </div>    
+
                 </div>
 
             </div>
 
             </div>
  
Line 450: Line 582:
 
                     <h2>Always be Responsible</h2>
 
                     <h2>Always be Responsible</h2>
 
                     <p>
 
                     <p>
                         We are ready to use Mag-HER2-someMagHER2some as a product to prepare for future commercialization and to face various challenges that may come from anyone or anywhere in the real world. In terms of ethics, China is different from foreign countries. As many Chinese iGEM teams, we do not have systematic bioethics learning before entering the laboratory. This is also a reason that we do not achieved a thoroughly ethical consideration of experimental animals before.
+
                         We are ready to use Mag-HER2-someMagHER2some as a product to prepare for future commercialization and to face various challenges that may come from anyone or anywhere in the
 +
                        real world. In terms of ethics, China is different from foreign countries. As many Chinese iGEM teams, we do not have systematic bioethics learning before entering the
 +
                        laboratory. This is also a reason that we do not achieved a thoroughly ethical consideration of experimental animals before.
 
                     </p>
 
                     </p>
  
 
                     <p>
 
                     <p>
                         However, once MagHER2some is in clinical trials involving human subjects, a new set of challenges arise, from ensuring informed consent, to protecting vulnerable research participants to guarantee their participation is voluntary and informed. That means we need take a much more strict ethical measure. Even though the further clinical trials only stay in design stage, we still need to ensure whether the plan is ethical enough.
+
                         However, once MagHER2some is in clinical trials involving human subjects, a new set of challenges arise, from ensuring informed consent, to protecting vulnerable research
 +
                        participants to guarantee their participation is voluntary and informed. That means we need take a much more strict ethical measure. Even though the further clinical trials
 +
                        only stay in design stage, we still need to ensure whether the plan is ethical enough.
 
                     </p>
 
                     </p>
  
 
                     <p>
 
                     <p>
                         Once again, there is still a long term exploration for us to see the benefits of MagHER2some. As an iGEM team, we need to pay more attention to self-monitoring, raise awareness of ethical counseling, and boldly ask before we achieve our goal.
+
                         Once again, there is still a long term exploration for us to see the benefits of MagHER2some. As an iGEM team, we need to pay more attention to self-monitoring, raise awareness
 +
                        of ethical counseling, and boldly ask before we achieve our goal.
 
                     </p>
 
                     </p>
 
                     <br>
 
                     <br>
 
                     <br>
 
                     <br>
                 </div>  
+
                 </div>
 
             </div>
 
             </div>
  
Line 473: Line 610:
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
                         [2] Sun J, Li Y, Liang XJ, Wang PC. Bacterial Magnetosome: A Novel Biogenetic Magnetic Targeted Drug Carrier with Potential Multifunctions. J Nanomater. 2011;2011(2011):469031-469043.
+
                         [2] Sun J, Li Y, Liang XJ, Wang PC. Bacterial Magnetosome: A Novel Biogenetic Magnetic Targeted Drug Carrier with Potential Multifunctions. J Nanomater.
 +
                        2011;2011(2011):469031-469043.
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
Line 482: Line 620:
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
                         [5] Sun JB, Wang ZL, Duan JH, Ren J, Yang XD, Dai SL, Li Y. Targeted distribution of bacterial magnetosomes isolated from Magnetospirillum gryphiswaldense MSR-1 in healthy Sprague-Dawley rats. J Nanosci Nanotechnol. 2009 Mar;9(3):1881-5.
+
                         [5] Sun JB, Wang ZL, Duan JH, Ren J, Yang XD, Dai SL, Li Y. Targeted distribution of bacterial magnetosomes isolated from Magnetospirillum gryphiswaldense MSR-1 in healthy
 +
                        Sprague-Dawley rats. J Nanosci Nanotechnol. 2009 Mar;9(3):1881-5.
 
                     </p>
 
                     </p>
 
                     <p>
 
                     <p>
                         [6] Xiang L, Wei J, Jianbo S, Guili W, Feng G, Ying L. Purified and sterilized magnetosomes from Magnetospirillum gryphiswaldense MSR-1 were not toxic to mouse fibroblasts in vitro. Lett Appl Microbiol. 2007 Jul;45(1):75-81.
+
                         [6] Xiang L, Wei J, Jianbo S, Guili W, Feng G, Ying L. Purified and sterilized magnetosomes from Magnetospirillum gryphiswaldense MSR-1 were not toxic to mouse fibroblasts in
 +
                        vitro. Lett Appl Microbiol. 2007 Jul;45(1):75-81.
 
                     </p>
 
                     </p>
 
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                         [7] Sun J, Tang T, Duan J, Xu PX, Wang Z, Zhang Y, Wu L, Li Y. Biocompatibility of bacterial magnetosomes: acute toxicity, immunotoxicity and cytotoxicity. Nanotoxicology. 2010 Sep;4(3):271-83.
+
                         [7] Sun J, Tang T, Duan J, Xu PX, Wang Z, Zhang Y, Wu L, Li Y. Biocompatibility of bacterial magnetosomes: acute toxicity, immunotoxicity and cytotoxicity. Nanotoxicology. 2010
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                        Sep;4(3):271-83.
 
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                         [10] Senkus E, Kyriakides S, Penault-Llorca F, Poortmans P, Thompson A, Zackrisson S, et al. Primary breast cancer: ESMO Clinical Practice Guidelines for diagnosis, treatment and follow-up. Ann Oncol. 2013;24(Suppl 6):7–23.
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                         [10] Senkus E, Kyriakides S, Penault-Llorca F, Poortmans P, Thompson A, Zackrisson S, et al. Primary breast cancer: ESMO Clinical Practice Guidelines for diagnosis, treatment
 +
                        and follow-up. Ann Oncol. 2013;24(Suppl 6):7–23.
 
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                     <p>
                         [11] European Medicines Agency. Summary of product characteristics: Herceptin.http://www.ema.europa.eu/docs/en_GB/document_library/EPAR_-_Product_Information/human/000278/WC500074922.pdf. Accessed 9 Feb 2016.
+
                         [11] European Medicines Agency. Summary of product characteristics:
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                        Herceptin.http://www.ema.europa.eu/docs/en_GB/document_library/EPAR_-_Product_Information/human/000278/WC500074922.pdf. Accessed 9 Feb 2016.
 
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                         [13] Sun JB, Wang ZL, Duan JH, Ren J, Yang XD, Dai SL, Li Y. Targeted distribution of bacterial magnetosomes isolated from Magnetospirillum gryphiswaldense MSR-1 in healthy Sprague-Dawley rats. J Nanosci Nanotechnol. 2009 Mar;9(3):1881-5.
+
                         [13] Sun JB, Wang ZL, Duan JH, Ren J, Yang XD, Dai SL, Li Y. Targeted distribution of bacterial magnetosomes isolated from Magnetospirillum gryphiswaldense MSR-1 in healthy
 +
                        Sprague-Dawley rats. J Nanosci Nanotechnol. 2009 Mar;9(3):1881-5.
 
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                         [14] [14]Meseret Amde, Jing-fu Liu, Zhi-Qiang Tan, Deribachew Bekana, Transformation and bioavailability of metal oxide nanoparticles in aquatic and terrestrial environments. A review. Environmental Pollution. 2017;vol. 230:250-267.
+
                         [14] [14]Meseret Amde, Jing-fu Liu, Zhi-Qiang Tan, Deribachew Bekana, Transformation and bioavailability of metal oxide nanoparticles in aquatic and terrestrial environments. A
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                        review. Environmental Pollution. 2017;vol. 230:250-267.
 
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Revision as of 15:50, 25 October 2020

Safety

Safety

Overview

When we had already chosen to develop a project that aims to diagnose HER2 positive breast cancer, we soon realized that Mag-HER2-someMagHER2some is designed for patients in urgent conditions, and we should take strict safety measures to ensure our final product is qualified. To aviod provoking tensions between doctor-patient relationships and make MagHER2some as a accountable product to users and the whole society, we considered and evaluated each safety and ethical issue that might happen in real world. ZJU-China 2019 was developed a project focus on female physical problems, either. The comprehensive discussion on bioethics and safety that they conducted last ye,,...ar provides useful guidance to us. As they mentioned before, it is of high importance for us to concentrate on self-monitoring and ethical counseling. For this reason, we considered about possible risks respecting laboratory, environment, clinical application, and society. Browse following contents of this page for more safety & ethics details. You can also move to Human Practice Page to figure out how we conducted our Human Practices activities with our consideration of safety and ethics.



Laboratory Safety

Working with living modified organisms is always risky. All standard precautions must be taken. Before starting to work in the lab, every member of our team was required to attend the laboratory safety lesson and take a biosafety examination. Moreover, we have received extensive guidance and supervision regarding all our activities took place in our laboratory, including study, discussion and equipment usage by our team PI, Prof. Ming Chen and experimental instructor, Associate Prof. Fan Yang to ensure the laboratory safety.


Wearing safety:Everyone wears protective lab coats, gloves and safety glasses before laboratory activities. Besides, due to the epidemic situation of COVID-19, everyone must wear a mask as he is in the lab.

Fig.1 Drawer specially for gloves and masks
Fig.2 Door hanging our protective lab coats

Storage safety:The chemical and biological reagents are stored in the proper place and suitable temperature. Hazardous or corrosive chemicals are stored separately.

Fig.3-5 Storage for chemical and biological reagents, students should record every time when using chemicals.

Fire and electricity safety: The temperature of the heater should not be set over 50℃ and the there must be at least one student in the lab when the heater is working. And the power should be turned off before the last one leaves the lab every day.

Fig.6 Power switch and heater

Safety Apparatus: Our iGEM lab is equipped with safety apparatus such as fire extinguishers, emergency showers, eyewash stations, and first aid kits in case of dire situations.

Fig.7&8 The fire blanket and the fire extinguisher.
Fig.9&10 The eyewash equipment and the emergency shower.
Fig.11 The first-aid case.

Waste disposal safety:

Fig. 12 Flow chart of waste disposal.
Fig. 13&14 Garbage classification

New safety measures under the epidemic situation of COVID-19: Due to the epidemic situation of COVID-19, all laboratories of Zhejiang University had strengthened the measures to prevent and control the virus. QR scanning and registration signing every day provided 2 entry records to track the members of ZJU-iGEM. And as we mentioned above, masks must be worn when in the lab.

Fig. 15-17 QR canning and signing for lab entry record

Insurance of Biosafety



As iGEM committee emphasized, we have paid great attention to the possible risks of MagHER2some during our entire process of iGEM. And we have complied with relevant regulations and completed the filling of safety forms and animal use form carfully a month earlier.

In this page, the main safety issues of our project design are discussed below.

Cell-free system

The production and release of genetically modified organisms (GMOs) are controversial topics within present scientific community[1], thus we also considered about the possibility risks may cause by two chassis organisms >Magnetospirillum gryphiswaldense and SHuffle® E.coli and other organisms used in MagHER2some. In accordance with iGEM’s safety rules and standards, we do not plan to release any GMOs actively in any cases to strictly aviod possible ecological disorders happening. Moreover, in accordance with iGEM’s safety rules and standards, our final product is based on native magnetosome and created a cell-free system instead of live bacteria. This design not only meets “no-release” principle perfectly, but also minimizes possible cytotoxicity and immunotoxicity caused by bacteria when our novel MRI contrast agent is injected into our users. What needs to be added here is the biotools we implemented on MagHER2some are all protein and without any nucleic acid, which means MagHER2some is totally nonhazardous and unable to express any gene in all circumstances, especially when it is released into environment by accdient or injected into patients' circulatory system.


BioBricks

A. Magnetosome

The main reason why we chose magnetosome as the most basic BioBricks is that it have been proven to be highly biocompatible[2]. It has been reported that chemical toxicity of magnetosome from iron ions is negligible negligible[3][4] due to the insolubility of Fe3O4. Therefore, the primary safety issues of magnetosome may be relevant to (a) their nanoscale size, which leads to embolism, blockage, and deposition in the body and (b) impurities, particularly proteins, nucleic acids, and polysaccharides associated with magnetosome extracted from bacterial cells, resulting in immunotoxicity.

As we had a further understanding of those studies related to the biocompatibility of magnetosome, we found out that existing studies have shown the body tissue distribution and host tissue elimination following administration of magnetosome into the vascular system [5] and in vitro cytotoxicity for mouse fibroblasts[6].

It has been observed that magnetosome displayed targeted distribution in Sprague DawleySD rat liver except other organs, suggesting that magnetosome may avoid incurring organ congestion or infarction in vivo rely on the lower likelihood of congregation than other nanoparticles.

Purified and sterilized magnetosomes were found to be nontoxic to mouse fibroblasts in vitro. Moreover, another research shows that the injection of 1 mg magnetosome did not increase body temperature of rabbits during the pyrogen test, which showed antigens or pyrogens free with magnetosome administration [7].


B. ZZ domain

ZZ domain is a homologous immunoglobulin (Ig)-binding domain which belongs to Staphy- lococcus aureus protein A (SpA). According to our biological engineering, we created a recombinant protein mamC-ZZ which is able to bind to the fragment crystallizable (Fc) region of single chain antibody fragment (scFv) tightly. ZZ domain is a reactive antibody-binding BioBricks, and SpA which ZZ domain belongs to is widely used in clinical application[8][9], refers to a conclusion that ZZ domain is safe enough to be used as a BioBricks.


C. single chain antibody fragment (scFv)

Single chain antibody fragment (scFv) is the most significant important part of our biological engineering design that determines diagnostic efficiency and imaging results of Mag-HER2-someMagHER2some. Accordingly, we chose a certain kind of scFv called modified from a widely use breast cancer medicine Trastuzumab, which has the ability to that binds with high affinity to the extracellular domain of HER2 in a high affinity way. Trastuzumab is a relatively safe and usually well-tolerated drug[10]. As a monoclonaln antibody, trastuzumab is not modulate by the classic routes of drug elimination[11]. Its clearance does not appear to occur by excretion and liver metabolism as in conventional drugs, but rather by an analogue mechanism relating to the homeostatic regulation of endogenous immunoglobulin G[12]. Thus, problems such as drug-drug interactions and interference with unwanted targets (frequently one of the main causes of drugs’ ‘adverse effects’) are unlikely.


Final Product: reflects biosafety as a whole
Those studies that mentioned above are all strong evidence which ensure all BioBricks of MagHER2some to be safe enough. However, there is still a long term exploration for us to implement our biological engineering into a reliable final product.


Interacrtion between BioBricks:We carried out a series of protein three-dimensional structure prediction about the result of the interaction between recombinant protein mamC-ZZ and Trastuzumab. No evidence shows that any effective domain has been changed or blocked because of interaction, refered MagHER2some to a therapeutic beneficial product.


Suitable Nanoscale: We decided to control the size of MagHER2some into a appopriate range (15~35 nm), which not only prevents that MagHER2some would be removed by reticuloendothelial system, but also ensure that MagHER2some can be excreted into urine and feces [13][14].


Further Clinical Trials: What needed to be mentioned again is we still need a long term exploration on biosafety. We will conduct further clinical trials of MagHER2some, and launch the corresponding drug instruction.You can see more clinical trials design here at Link.

Finally, we planning to optimize the producing procedure of the final products, which is designed with nonhazardous materials and harmless reagents.

Bioethics

We have controlled possible risks from two perspective: laboratory safety and biological engineering safety. However, there are still many potential ethical risks need to be pre-judged.

“Discussions of bioethical challenges take place in the media, in the academy, in classrooms, but also in labs, offices, and hospital wards.” Questions in bioethics are not just for us. From another perspective, bioethics can be considered in terms of people, animals (experimental objects) and the environment.

All ethical safety considerations of Mag-HER2-someMagHER2some are discussed as below.



During iGEM



Experimental Animal Use: As the very beginning step of bioethics consideration, we have carried on the comprehensive discussion about this part through our animal use form. Click here.

Moreover, we have been reminded that some contents of our animal use form still need to be improved, because most of the in vitro experiments on Mag-HER2-someMagHER2some have not yet been obtained at that time. Now, in order to supplement and clarify the contents of animal work, we have redesigned the animal experiments based on the results obtained from in vitro experiments, and focus on more details of animal welfare. Please see the file below for details.

Commercial Matters: We are devoted to bring MagHER2some into medical market, and hope it that can really benefit to no matter doctors or patients. More commercial risks at here. (商业企划书wiki)

Public Engagement: We believe that a scientific research, our sponsors – taxpayers have the right to know and participate, you can see how the public participated in our projects on Link, and how our projects are responsible for the public, such as protecting the personal portrait right of patients.



After iGEM



Patent and Intellectual Property Protection:  We plan to patent Mag-HER2-someMagHER2some after iGEM. Therefore, we have already consulted a law firm for relevant issues.

Strictly Supplement: Considering biosecurity, we only provide the final products to certified medical institutions only. In this way, the possibility of human error, which people misuse or abuse our products, is minimized.

Product Instructions: In terms of a thorough biosafety guarantee, we are going to undertake further clinical trials and upload a informative instructions to illustrate the right execution to every doctor who will use MagHER2some in future. More details of clinical trials at here.

Always be Responsible

We are ready to use Mag-HER2-someMagHER2some as a product to prepare for future commercialization and to face various challenges that may come from anyone or anywhere in the real world. In terms of ethics, China is different from foreign countries. As many Chinese iGEM teams, we do not have systematic bioethics learning before entering the laboratory. This is also a reason that we do not achieved a thoroughly ethical consideration of experimental animals before.

However, once MagHER2some is in clinical trials involving human subjects, a new set of challenges arise, from ensuring informed consent, to protecting vulnerable research participants to guarantee their participation is voluntary and informed. That means we need take a much more strict ethical measure. Even though the further clinical trials only stay in design stage, we still need to ensure whether the plan is ethical enough.

Once again, there is still a long term exploration for us to see the benefits of MagHER2some. As an iGEM team, we need to pay more attention to self-monitoring, raise awareness of ethical counseling, and boldly ask before we achieve our goal.



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