Difference between revisions of "Team:BITSPilani-Goa India/Experiments/Kill Switch"

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header {
 
header {
 
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}</style><header class="d-flex justify-content-center"><div class="custom-container"><div id="header-background"></div><div id="heading"><h1>Atmosphere Regulated Kill Switch</h1></div><a href="https://freepik.com" rel="noopener" target="_blank"><span data-placement="top" id="bg-attribution" title="Photo from Freepik"></span></a></div></header><main class="theme-journal"><div class="custom-container"><div class="row"><div class="content fullwidth"><article><div class="accordion" id="collapsibleSections"><div class="card"><div class="card-header" id="headingOne"><h2 class="mb-0"><button aria-controls="collapseOne" aria-expanded="true" class="btn collapsed" data-target="#collapseOne" data-toggle="collapse" type="button"><span>FNR Characterisation</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingOne" class="collapse" id="collapseOne"><div class="card-body"><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/7/78/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--FNR_Characterisation.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/7/78/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--FNR_Characterisation.pdf" title="FNR Characterisation" type="application/pdf"/></div></div></div><div class="card"><div class="card-header" id="headingTwo"><h2 class="mb-0"><button aria-controls="collapseTwo" aria-expanded="true" class="btn collapsed" data-target="#collapseTwo" data-toggle="collapse" type="button"><span>pH Dependency of FNR Promoter</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingTwo" class="collapse" id="collapseTwo"><div class="card-body"><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/9/9f/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--pH_Dependency.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/9/9f/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--pH_Dependency.pdf" title="pH Dependency of FNR Promoter" type="application/pdf"/></div></div></div><div class="card"><div class="card-header" id="headingThree"><h2 class="mb-0"><button aria-controls="collapseThree" aria-expanded="true" class="btn collapsed" data-target="#collapseThree" data-toggle="collapse" type="button"><span>Killswitch Response Time Determination</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingThree" class="collapse" id="collapseThree"><div class="card-body"><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/a/ab/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--Response_Time.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/a/ab/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--Response_Time.pdf" title="Killswitch Response Time Determination" type="application/pdf"/></div></div></div><div class="card"><div class="card-header" id="headingFour"><h2 class="mb-0"><button aria-controls="collapseFour" aria-expanded="true" class="btn collapsed" data-target="#collapseFour" data-toggle="collapse" type="button"><span>Site Directed Mutagenesis</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingFour" class="collapse" id="collapseFour"><div class="card-body"><p>To tune the Kd value of the FNR promoter, we propose to use the following protocol.</p><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/a/ae/T--BITSPilani-Goa_India--docs--Experiments--Protocols--Site_Directed_Mutagenesis.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/a/ae/T--BITSPilani-Goa_India--docs--Experiments--Protocols--Site_Directed_Mutagenesis.pdf" title="Site Directed Mutagenesis" type="application/pdf"/></div></div></div></div></article><div id="buttons"><a class="button prev" href="https://2020.igem.org/Team:BITSPilani-Goa_India/Experiments/pFruB-Cra_System"><span class="button-background"><span aria-hidden="" class="circle"><span class="icon arrow"></span></span></span><span class="button-text">pFruB-Cra System</span></a><a class="button next" href="https://2020.igem.org/Team:BITSPilani-Goa_India/Experiments/Inoculant"><span class="button-background"><span aria-hidden="" class="circle"><span class="icon arrow"></span></span></span><span class="button-text">Inoculant</span></a></div></div></div></div></main><footer><div id="footerNav"><div class="container"><div class="row justify-content-between"><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Project</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Description">Description</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Design">Design</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Model">Model</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Engineering">Engineering</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Safety">Safety</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Implementation">Implementation</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Human Practices</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Human_Practices">Human-Centered Design</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Education">Science Communication</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Parts</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Parts">Parts</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Journal</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Notebook">Notebook</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Experiments">Experiments</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Appendix">Appendix</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Team</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Team">Team</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Attributions">Attributions</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Collaborations">Collaborations</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Contribution</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Contribution">Overview</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Software">Software</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Entrepreneurship</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Entrepreneurship">Entrepreneurship</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Judging</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Judging">Judging</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/https:/igem.org/2020_Judging_Form?id=3512">Judging Form</a></li></ul></div></div></div></div><div id="footerBrand"><div class="container"><div class="row justify-content-center"><div id="footerTeamLogo"></div><div id="BITSLogo"></div></div><p>iGEM BITS Goa</p><p>Birla Institute of Technology and Science, Pilani</p><p>K K Birla Goa Campus</p><p>NH-17B, Sancoale, Goa, India</p><div class="row justify-content-center" 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}</style><header class="d-flex justify-content-center"><div class="custom-container"><div id="header-background"></div><div id="heading"><h1>Atmosphere Regulated Kill Switch</h1></div><a href="https://freepik.com" rel="noopener" target="_blank"><span data-placement="top" id="bg-attribution" title="Photo from Freepik"></span></a></div></header><main class="theme-journal"><div class="custom-container"><div class="row"><div class="content fullwidth"><article><div class="accordion" id="collapsibleSections"><div class="card"><div class="card-header" id="headingOne"><h2 class="mb-0"><button aria-controls="collapseOne" aria-expanded="true" class="btn collapsed" data-target="#collapseOne" data-toggle="collapse" type="button"><span>FNR Characterisation</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingOne" class="collapse" id="collapseOne"><div class="card-body"><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/7/78/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--FNR_Characterisation.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/7/78/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--FNR_Characterisation.pdf" title="FNR Characterisation" type="application/pdf"/></div></div></div><div class="card"><div class="card-header" id="headingTwo"><h2 class="mb-0"><button aria-controls="collapseTwo" aria-expanded="true" class="btn collapsed" data-target="#collapseTwo" data-toggle="collapse" type="button"><span>pH Dependency of FNR Promoter</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingTwo" class="collapse" id="collapseTwo"><div class="card-body"><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/9/9f/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--pH_Dependency.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/9/9f/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--pH_Dependency.pdf" title="pH Dependency of FNR Promoter" type="application/pdf"/></div></div></div><div class="card"><div class="card-header" id="headingThree"><h2 class="mb-0"><button aria-controls="collapseThree" aria-expanded="true" class="btn collapsed" data-target="#collapseThree" data-toggle="collapse" type="button"><span>Kill switch Response Time Determination</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingThree" class="collapse" id="collapseThree"><div class="card-body"><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/a/ab/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--Response_Time.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/a/ab/T--BITSPilani-Goa_India--docs--Experiments--Killswitch--Response_Time.pdf" title="Killswitch Response Time Determination" type="application/pdf"/></div></div></div><div class="card"><div class="card-header" id="headingFive"><h2 class="mb-0"><button aria-controls="collapseFour" aria-expanded="true" class="btn collapsed" data-target="#collapseFour" data-toggle="collapse" type="button"><span>Electrophoretic Mobility Shift Assay</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingFour" class="collapse" id="collapseFour"><div class="card-body"><p>To find the K<sub>d</sub> value of the FNR promoter, we propose to use the following protocol.</p><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/4/4c/T--BITSPilani-Goa_India--docs--Experiments--Protocols--EMSA.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/4/4c/T--BITSPilani-Goa_India--docs--Experiments--Protocols--EMSA.pdf" title="Electrophoretic Mobility Shift Assay" type="application/pdf"/></div></div></div><div class="card"><div class="card-header" id="headingFive"><h2 class="mb-0"><button aria-controls="collapseFive" aria-expanded="true" class="btn collapsed" data-target="#collapseFive" data-toggle="collapse" type="button"><span>Site Directed Mutagenesis</span><i class="icon-dropdown"></i></button></h2></div><div aria-labelledby="headingFive" class="collapse" id="collapseFive"><div class="card-body"><p>To tune the K<sub>d</sub> value of the FNR promoter, we propose to use the following protocol.</p><p>To download this document, click <a href="https://static.igem.org/mediawiki/2020/a/ae/T--BITSPilani-Goa_India--docs--Experiments--Protocols--Site_Directed_Mutagenesis.pdf">here</a>.</p><embed src="https://static.igem.org/mediawiki/2020/a/ae/T--BITSPilani-Goa_India--docs--Experiments--Protocols--Site_Directed_Mutagenesis.pdf" title="Site Directed Mutagenesis" type="application/pdf"/></div></div></div></div></article><div id="buttons"><a class="button prev" href="https://2020.igem.org/Team:BITSPilani-Goa_India/Experiments/pFruB-Cra_System"><span class="button-background"><span aria-hidden="" class="circle"><span class="icon arrow"></span></span></span><span class="button-text">pFruB-Cra System</span></a><a class="button next" href="https://2020.igem.org/Team:BITSPilani-Goa_India/Experiments/Inoculant"><span class="button-background"><span aria-hidden="" class="circle"><span class="icon arrow"></span></span></span><span class="button-text">Inoculant</span></a></div></div></div></div></main><footer><div id="footerNav"><div class="container"><div class="row justify-content-between"><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Project</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Description">Description</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Design">Design</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Model">Model</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Engineering">Engineering</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Safety">Safety</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Implementation">Implementation</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Human Practices</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Human_Practices">Human-Centered Design</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Education">Science Communication</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Parts</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Parts">Parts</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Journal</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Notebook">Notebook</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Experiments">Experiments</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Appendix">Appendix</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Team</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Team">Team</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Attributions">Attributions</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Collaborations">Collaborations</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Contribution</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Contribution">Overview</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Software">Software</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Entrepreneurship</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Entrepreneurship">Entrepreneurship</a></li></ul></div><div class="col-sm-6 col-md-4 col-lg-3 py-2"><a class="footer-heading">Judging</a><ul><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/Judging">Judging</a></li><li class="py-1"><a href="https://2020.igem.org/Team:BITSPilani-Goa_India/https:/igem.org/2020_Judging_Form?id=3512">Judging Form</a></li></ul></div></div></div></div><div id="footerBrand"><div class="container"><div class="row justify-content-center"><div id="footerTeamLogo"></div><div id="BITSLogo"></div></div><p>iGEM BITS Goa</p><p>Birla Institute of Technology and Science, Pilani</p><p>K K Birla Goa Campus</p><p>NH-17B, Sancoale, Goa, India</p><div class="row justify-content-center" 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Revision as of 18:03, 26 October 2020

Atmosphere Regulated Kill Switch | SugarGain | iGEM BITS Goa

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Atmosphere Regulated Kill Switch

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To find the Kd value of the FNR promoter, we propose to use the following protocol.

To download this document, click here.

To tune the Kd value of the FNR promoter, we propose to use the following protocol.

To download this document, click here.