Difference between revisions of "Team:Fudan/Parts"

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(Undo revision 250068 by Zhenru-Zhang (talk))
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   <h2>Composite Part </h2>
 
   <h2>Composite Part </h2>
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    <img src="https://static.igem.org/mediawiki/2020/8/8b/T--Fudan--map_2.svg" alt="map of calcium intake" />
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  </div>
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  <div class="column third_size">
 
     <p>Besides successful expression in the engineered strains(E.coli), the secretion of CaAP from bacteria to intestine is of vital importance as well. Five signal peptides are selected to mediate CaAP translocation through the bacterial inner membrane, including NSP4, OmpA, DsbA, PelB, PhoA. They are all composed of a N-domain of about 2-10 amino acids, a hydrophobic H-domain of about 10–20 amino acids and a C-domain allowing for the cleavage of the signal peptidase after secretion. By adding a signal peptide signal peptide to the N terminus of CaAP,CaAP can be eventually secreted into the lumen of digestive tract and display its robust function of aiding calcium absorption.</p>
 
     <p>Besides successful expression in the engineered strains(E.coli), the secretion of CaAP from bacteria to intestine is of vital importance as well. Five signal peptides are selected to mediate CaAP translocation through the bacterial inner membrane, including NSP4, OmpA, DsbA, PelB, PhoA. They are all composed of a N-domain of about 2-10 amino acids, a hydrophobic H-domain of about 10–20 amino acids and a C-domain allowing for the cleavage of the signal peptidase after secretion. By adding a signal peptide signal peptide to the N terminus of CaAP,CaAP can be eventually secreted into the lumen of digestive tract and display its robust function of aiding calcium absorption.</p>
 
     <p>The 5 signal peptides are listed below.<p>
 
     <p>The 5 signal peptides are listed below.<p>

Revision as of 11:58, 26 October 2020

 
parts

一句短语概括整个页面,不要用overview这类无实际意义的词或词组

页面摘要,或者是单项奖核心点 Our project aims at converting engineered Our project aims at converting engineered Our project aims at converting engineered Our project aims at converting engi neered Our project aims at converting engineered Our project aims at converting engineered Our project aims at converting engineered Our project aims at converting engineered

Parts Table

本页面特殊的 groupparts 自动生成表格,需要先关掉html再打开

<groupparts>iGEM20 Fudan</groupparts>

Basic Part

map of calcium intake

CaAP(Calcium Absorption Peptide) is an artificially designed peptide to promote calcium absorption of intestinal epithelial cells. The sequence design of CaAP is based on calcium-binding peptides, a class of oligopeptides capable of chelating calcium, which have been found in hen egg yolk, cow milk casein, whey, soy, wheat germ and tilapia fish, etc. and are capable of facilitating calcium uptake in Caco-2 cells. Moreover, the biosafety of the peptides used in our design can be guaranteed as the MTT assay have shown their absence of cytotoxicity[1].

The whole sequence of CaAP contains 5 different calcium-binding peptides: GPAGPHGPVG, FDHIVY, YQEPVIAPKL[1], NDEELNK[2], and DHTKE[3], Among these peptides, GPAGPHGPVG, FDHIVY, YQEPVIAPKL and NDEELNK function by forming calcium-peptide complex through Asp and Glu residues[1][2]. As for DHTKE, it interacts with the bivalent calcium ion by carboxyl oxygen and amino nitrogen of Asp and Glu as well as the imidazole nitrogen atoms of His residue[3].

To efficiently express CaAP in the engineered strains(E.coli) and allow them to play a role when secreted into the extracellular space, sequences of the 5 mentioned oligopeptides are linked together through FR junctions(Phe-Arg). Hence, they could be expressed in the form of a whole peptide in the engineered bacteria and later cleaved into functional oligopeptides in the presence of digestive enzymes in the intestinal lumen.

We also added 6x-His tag to the C terminal of CaAP for its purification and characterization.

Composite Part

map of calcium intake

Besides successful expression in the engineered strains(E.coli), the secretion of CaAP from bacteria to intestine is of vital importance as well. Five signal peptides are selected to mediate CaAP translocation through the bacterial inner membrane, including NSP4, OmpA, DsbA, PelB, PhoA. They are all composed of a N-domain of about 2-10 amino acids, a hydrophobic H-domain of about 10–20 amino acids and a C-domain allowing for the cleavage of the signal peptidase after secretion. By adding a signal peptide signal peptide to the N terminus of CaAP,CaAP can be eventually secreted into the lumen of digestive tract and display its robust function of aiding calcium absorption.

The 5 signal peptides are listed below.

Signal Peptide Number for Registry
NSP4 BBa_K3606042
OmpA BBa_K3606043
DsbA BBa_K3606030
PelB BBa_K208004
PhoA BBa_K808028

References

[1] Three Newly Isolated Calcium-Chelating Peptides from Tilapia Bone Collagen Hydrolysate Enhance Calcium Absorption Activity in Intestinal Caco-2 Cells. Wanwen Liao, Hui Chen, Wengang Jin, Zhennai Yang, Yong Cao, and Jianyin Miao. Journal of Agricultural and Food Chemistry 2020 68 (7), 2091-2098. [2] In vitro digestion profile and calcium absorption studies of a sea cucumber ovum derived heptapeptide–calcium complex. Pengbo Cui, Songyi Lin, Ziqi Jin, Beiwei Zhu, Liang Song and Na Sun. Food Funct., 2018,9, 4582-4592. [3] An Exploration of the Calcium-Binding Mode of Egg White Peptide, Asp-His-Thr-Lys-Glu, and In Vitro Calcium Absorption Studies of Peptide–Calcium Complex. Na Sun, Ziqi Jin, Dongmei Li, Hongjie Yin, and Songyi Lin. Journal of Agricultural and Food Chemistry 2017 65 (44), 9782-9789.

每个章节标题用h2 为了搜索引擎全页面只能一个h1标签

map of calcium intake

在宽屏,这部分内容占页面1/3;窄屏就是全幅。添加了column同时 图1/3 + 字2/3 正好宽屏的一幅。 China has an estimated 70 million osteo porosis patien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estimated 70 million osteoporosis patien

However, for the Chinese population, the bottlenecks are as follows:

  1. 注意这里列表的写法 页面字会变深 突出内容 ol是编数字的 nts
  2. calcium-supplementing pills daste
  3. The body's absorptioes as calcium intake increases
  4. Vegetables conta列表的写法 页面字会变深 突出内容 ol是编数字的 ul是没有标数字的列表

However, the currently popular calcium supplement method on the market is either to adjust diet or to consume a lot of calcium supplementing pills. For the elderly, they suffer from poor memory or neglect the importance of calcium pills, often forgetting to consume the supplement; for children, they often refuse to take calcium pills or to maintain some diet high in calcium, thus requiring the "liquid calcium" method to ensure sufficient calcium intake. Ho可以 继续大段内容

章节内容的分段就用p开p关,额外需要关注的可以套一个highlight的框,有多种版本

章节内容的分段就用p开p关

章节内容的分段就用p开p关,额外需要关注的可以套一个highlight的框,细看 https://2020.igem.org/Resources/Template_Documentation#highlight

章节内容的分段就用p开p关

章节内容的分段就用p开p关 EXAM 外部链接 href尽量使用https

  • 注意这里列表的写法 页面字会变深 突出内容 ul是没有标数字的列表 nts
  • calcium-supple menting pills don’t haat taste
  • Vegetables conta列表的写法 页面字会变深 突出内容 ol是编数字的 ul是没有标数字的列表

章节内容的分段就用p开p关

又来个章节 sis

引入文字 ion.

Firstly, the product is designed for oral use and our target user is the elderly. 英文分项不需要ol或ul

  1. The produc
  2. The short pep
  3. The expression level of short peptides has a threshold, preventing any excessive calcium absorption that might lead to hypercalcemia 注意句子超长后的回折
  4. There is a kill swit.

Based on relevant research, the product is exp 章节内分段 ina. tien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estimated 70 million osteoporosis pat

Compared w 章节内分段 ique advantages tien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estimated 70 million osteoporosis pat tien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estimated 70 million osteoporosis pat tien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estimated 70 million osteoporosis pat.

Header 1 这是igem hq的表格的写法 Header 2
Content A 1 Content B 1
Content A 2 Content B 2 这是igem hq的表格的写法。表格都需要说明,之前之后都会有p来文字

Name Item Name Item Price
Alvin Eclair $0.87
Alan Jellybean $3.76
Jonathan Lollipop $7.00

Calciu 章节内分段 fety. tien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estima ted 70 million osteoporosis pat tien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estimated 70 mill ion osteoporosis pattien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estimated 70 million osteoporosis pat

From the us 章节内分段 etition.

再来例子 Market Analysis

文本在左侧一半,宽屏 According to the Chinese Dietetic Sociietary Nutrient Intakes of Chinese Residents", the calcium requirement for infants and young children increases with age, from 300mg/day to 800mg/day, and the calcium requirement for adolescents reaches 1000mg/day. The amof the required intake, with the small exception of some coastal and pastoral areas 图片在右侧一半

这是igem hq的表格的写法 Header 2 Header 3
Content A 1 Content B 1 Content C 1
列融合 Content C 2 这是igem hq的表格的写法。半幅或者2/3幅可以用。
行融合

用br了
calcium intake graph

每页结束需要小结,可以 ul ol 列表highlight,可以是每页第一段的另一种写法fety. tien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estima ted 70 million osteoporosis pat tien China has an estimated 70 million osteoporosis patien China has an estimated 70 million osteoporosis patienChina has an estimated 70 million oste oporosis patienChina has an estimated 70 mi 每页结束需要小结,可以 ul ol 列表highlight,可以是每页第一段的另一种写法

Signature: Mingwei Zhenru Gaochen