Future
We truly believe that miRNA.DOC can make a great impact on this world. Throughout the preparation in the past year, we are aware that we need more time for lab work. Thus, we've listed some possible future plans for our project in the hope of truly implementing miRNA.DOC in the real world.
Validating Freeze-drying
We have to prove it feasible to freeze-dry the reagents and our designed toehold switches onto the wall of the reaction tube. Also, we need to make comparisons with our current method to modify the required volume of each reagent or reaction time.
Salivary Purification and RNA Amplification
The complexity of salivary samples differs a lot from one another due to individual differences. Also, the amount of the salivary miRNA is too little for toehold switches to detect. These suggest that the pretreatment of every sample may be required for quality control. Thus, we will design and conduct experiments on salivary purification and RNA amplification after successfully reaching hospitals or labs to receive salivary samples from different patients in compliance with safety. The file below is the protocol we are working on.
Finding thresholds
We need to collect samples from oral cancer patients with different stages of the disease to find out the threshold for each stage. These thresholds help doctors know how serious patients' health conditions are. Also, doctors can collect quantitative data and conduct better medical practices through long-term tracking.
Reference
- Pardee, K., Green, A. A., Ferrante, T., Cameron, D. E., DaleyKeyser, A., Yin, P., & Collins, J. J. (2014). Paper-based synthetic gene networks. Cell, 159(4), 940–954. https://doi.org/10.1016/j.cell.2014.10.00
- Kulkarni, R. D., Mishra, M. N., Mohanraj, J., Chandrasekhar, A., Ajantha, G. S., Kulkani, S., & Bhat, S. (2018). Development of a dry-reagent mix-based polymerase chain reaction as a novel tool for the identification of Acinetobacter species and its comparison with conventional polymerase chain reaction. Journal of laboratory physicians, 10(1), 68–72. https://doi.org/10.4103/JLP.JLP_74_17
- World Health Organization. Clinical trials. Available online: https://www.who.int/health-topics/clinical-trials/#tab=tab_1 (accessed on 18 October 2020).
- Du, Y., Hughes, R. A., Bhadra, S., Jiang, Y. S., Ellington, A. D., & Li, B. (2015). A Sweet Spot for Molecular Diagnostics: Coupling Isothermal Amplification and Strand Exchange Circuits to Glucometers. Scientific reports, 5, 11039. https://doi.org/10.1038/srep11039
- Biolabs. (2019). PURExpress® In Vitro Protein Synthesis: Instruction Manual. Ipswich, MA: Author