Team:WHU-China/Parts

Collaborations

       Although wet lab work is relatively limited for us this year, we still use and construct several parts which are considered as an important part of our project. To efficiently obtain these parts, we asked two companies, IDT and GenScript, to synthesize some of them and send to us. Besides, we also used colony PCR to get several parts from the original bacteria strain directly. As for the parts of chemokines, we bought the products of them and characterized them directly. However, due to the limited time for experiments, we didn’t get all of these parts and enough data for those we got. And that is also why we haven’t submitted composite parts this year. Nevertheless, we are still glad to share what we got with other teams so we have submitted all our new basic parts and the data we obtained to the registry and we have constructed a part collection composed of seven parts of chemokines (with related data) for future teams to use!

Basic Parts
Name Description Type Length
BBa_I746361 PO promoter Promoter 92bp
BBa_K649000 las promoter Promoter 83bp
BBa_R0071 rhl promoter Promoter 53bp
BBa_J23100 Constitutive promoter Promoter 35bp
BBa_K2965011 Enhanced T7 promoter 1 Promoter 23bp
BBa_K3562002 Promoter activated by LasR/AHL complex (pLasRV) Promoter 155bp
BBa_B0030 RBS.1(strong) RBS 15bp
BBa_B0034 RBS based on Elowitz repressilator RBS 12bp
BBa_B1002 Terminator Terminator 34bp
BBa_B0010 T1 from E. coli rrnB Terminator 80bp
BBa_C0160 autoinducer inactivation enzyme aiiA (no LVA) Coding 756bp
BBa_K855004 pvdQ gene form pseudomonas aeruginosa PAO1 with his tag added before stop codon Coding 2307bp
BBa_K3562000 Acylase coding gene with His tag (AiiC) Coding 2565bp
BBa_K3562001 Acylase coding gene with His tag (AiiO) Coding 837bp
BBa_K1157001 Quorum sensing receptor (PQSR) Coding 999bp
BBa_I746352 delta activator from phiR73 phage (phiR73 delta) Translational_Unit 264bp
BBa_C0179 LasR activator (LasR) Coding 723bp
BBa_C0178 Autoinducer synthetase (LasI) Coding 609bp
BBa_C0171 rhlR repressor/activator (RhlR) Coding 729bp
BBa_C0170 Autoinducer synthetase for BHL and HHL (RhlI) Coding 609bp
BBa_E0040 Wild-type GFP (GFP mut3b) Coding 720bp
BBa_J06504 monomeric RFP optimized for bacteria(mCherry) Reporter 714bp
BBa_K302032 Antitoxin coding gene(mazE) Coding 249bp
BBa_K1075037 Toxin coding gene and and terminator(mazF-TT) Intermediate 476bp
BBa_K831001 Antitoxin coding gene (HipB) Coding 267bp
BBa_K3562005 Toxin coding gene (HipA) Coding 1323bp
BBa_K3562003 Antitoxin coding gene (PemI) Coding 258bp
BBa_K3562004 Toxin coding gene (PemK) Coding 402bp
BBa_K3562006 Antitoxin coding gene (sokA) Coding 30bp
BBa_K3562007 Toxin coding gene (hokA) Coding 153bp
BBa_K3562008 Antitoxin coding gene (ToxI) Coding 252bp
BBa_K3562009 Toxin coding gene (ToxN) Coding 516bp
Part collection: A toolbox of chemotaxis experiments
Name Description Type Length
BBa_K2957001 Chemokine coding gene with FLAG tag (IL-8-FLAg tag) Coding 338bp
BBa_K3562010 Chemokine coding gene (CXCL-1) Coding 219bp
BBa_K3562011 Chemokine coding gene (CXCL-2) Coding 219bp
BBa_K3562012 Chemokine coding gene (CXCL-3) Coding 219bp
BBa_K3562013 Chemokine coding gene (CCL-2) Coding 228bp
BBa_K3562014 Chemokine coding gene (CCL-3) Coding 207bp
BBa_K3562015 Chemokine coding gene (CCL-8) Coding 228bp