Team:GunnVistaPingry US/Collaborations
UiOslo_Norway
We reviewed their code and suggested few changes. Based on our feedback they implemented the following changes:
They also have plans to implement the following changes, as well as implement code to close CSV files when they are not needed.
- Implemented serialization
- Uploaded sample CSV data
They also have plans to implement the following changes, as well as implement code to close CSV files when they are not needed.
- Look into using a dictionary, the parsing in the code causes restrictions on the users end if new parameters need to be added
- Add more documentation to make it more readable and clear that Class can be set by user in parameters.txt
- Implement try catch blocks
- Add error handling to check for errors, especially while reading and opening files
- Close any system resources like file and network handles once they are not needed
NYC_Earthians
- Hosted a virtual meetup
- Explore Cow Bos Taurus, Baboon genome work
- Intuitive situation: Explore a single gene
-
Using CRISPR instead of CRISPRi
- e.g. use transcription start site as 0 and aim for after TSS in exon regions rather than the CRISPRi method
- Fairly simple transition ideas from CRISPRi → CRISPR due to their shared essential structural components
